Bispecific Targeting of Conserved Epitopes Enables Pan-Hantavirus Neutralization
Abstract
Hantaviruses cause renal and cardiopulmonary syndromes with case-fatality rates up to 40%, yet no approved antiviral therapy exists. Antigenic divergence between Old World and New World hantaviruses has impeded the development of broadly protective antibody therapeutics. Here, we isolated neutralizing antibodies from convalescent donors and identified two lead antibodies targeting distinct conserved epitopes. XA-3H12 potently neutralizes Old World hantaviruses, whereas XA-044 broadly neutralizes HTNV, SNV and ANDV. Cryo-EM structures revealed that XA-044 recognizes the apical Gn-Gc interface, whereas XA-3H12 binds the basal region of Gc domain II, defining two non-overlapping conserved neutralization sites. Guided by these structures, we engineered a bispecific IgG-scFv that integrates the breadth and potency of both parental antibodies and achieves broad hantavirus neutralization. In mouse models, the IgG-scFv blocked entry of diverse hantavirus pseudoviruses in vivo and conferred post-exposure protection against lethal HTNV challenge, establishing a dual-epitope bispecific antibody candidate for broad hantavirus intervention.
References
1 Kuhn, J. H. & Schmaljohn, C. S. A Brief History of Bunyaviral Family Hantaviridae. Diseases 11, doi:10.3390/diseases11010038 (2023).
2 Kruger, D. H., Figueiredo, L. T., Song, J. W. & Klempa, B. Hantaviruses--globally emerging pathogens. J Clin Virol 64, 128-136, doi:10.1016/j.jcv.2014.08.033 (2015).
3 Engdahl, T. B. et al. Broad and potently neutralizing monoclonal antibodies isolated from human survivors of New World hantavirus infection. Cell Rep 35, 109086, doi:10.1016/j.celrep.2021.109086 (2021).
4 Jonsson, C. B., Figueiredo, L. T. & Vapalahti, O. A global perspective on hantavirus ecology, epidemiology, and disease. Clin Microbiol Rev 23, 412-441, doi:10.1128/CMR.00062-09 (2010).
5 Vapalahti, O. et al. Hantavirus infections in Europe. Lancet Infect Dis 3, 653-661, doi:10.1016/s1473-3099(03)00774-6 (2003).
6 Vial, P. A. et al. Hantavirus in humans: a review of clinical aspects and management. Lancet Infect Dis 23, e371-e382, doi:10.1016/S1473-3099(23)00128-7 (2023).
7 Figueiredo, L. T., Souza, W. M., Ferres, M. & Enria, D. A. Hantaviruses and cardiopulmonary syndrome in South America. Virus Res 187, 43-54, doi:10.1016/j.virusres.2014.01.015 (2014).
8 Watson, D. C. et al. Epidemiology of Hantavirus infections in humans: a comprehensive, global overview. Crit Rev Microbiol 40, 261-272, doi:10.3109/1040841X.2013.783555 (2014).
9 Avsic-Zupanc, T., Saksida, A. & Korva, M. Hantavirus infections. Clin Microbiol Infect 21S, e6-e16, doi:10.1111/1469-0691.12291 (2019).
10 Afzal, S. et al. Hantavirus: an overview and advancements in therapeutic approaches for infection. Front Microbiol 14, 1233433, doi:10.3389/fmicb.2023.1233433 (2023).
11 Plyusnin, A., Vapalahti, O. & Vaheri, A. Hantaviruses: genome structure, expression and evolution The Journal of general virology 77 ( Pt 11) (1996).
12 Serris, A. et al. The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism. Cell 183, 442-456 e416, doi:10.1016/j.cell.2020.08.023 (2020).
13 Guo, L. et al. High-resolution in situ structures of hantavirus glycoprotein tetramers. Cell 189, 2731-2747 e2715, doi:10.1016/j.cell.2026.01.030 (2026).
14 Rissanen, I. et al. Structural Transitions of the Conserved and Metastable Hantaviral Glycoprotein Envelope. J Virol 91, doi:10.1128/JVI.00378-17 (2017).
15 Guardado-Calvo, P. et al. Mechanistic Insight into Bunyavirus-Induced Membrane Fusion from Structure-Function Analyses of the Hantavirus Envelope Glycoprotein Gc. PLoS Pathog 12, e1005813, doi:10.1371/journal.ppat.1005813 (2016).
16 Willensky, S. et al. Crystal Structure of Glycoprotein C from a Hantavirus in the Post-fusion Conformation. PLoS Pathog 12, e1005948, doi:10.1371/journal.ppat.1005948 (2016).
17 Heiskanen, T. et al. Phage-displayed peptides mimicking the discontinuous neutralization sites of puumala Hantavirus envelope glycoproteins. Virology 262, 321-332, doi:10.1006/viro.1999.9930 (1999).
18 Stass, R. et al. Mechanistic basis for potent neutralization of Sin Nombre hantavirus by a human monoclonal antibody. Nat Microbiol 8, 1293-1303, doi:10.1038/s41564-023-01413-y (2023).
19 Levanov, L., Iheozor-Ejiofor, R. P., Lundkvist, A., Vapalahti, O. & Plyusnin, A. Defining of MAbs-neutralizing sites on the surface glycoproteins Gn and Gc of a hantavirus using vesicular stomatitis virus pseudotypes and site-directed mutagenesis. J Gen Virol 100, 145-155, doi:10.1099/jgv.0.001202 (2019).
20 Mittler, E. et al. Human antibody recognizing a quaternary epitope in the Puumala virus glycoprotein provides broad protection against orthohantaviruses. Sci Transl Med 14, eabl5399, doi:10.1126/scitranslmed.abl5399 (2022).
21 Mittler, E. et al. Structural and mechanistic basis of neutralization by a pan-hantavirus protective antibody. Sci Transl Med 15, eadg1855, doi:10.1126/scitranslmed.adg1855 (2023).
22 Higa, M. M., Petersen, J., Hooper, J. & Doms, R. W. Efficient production of Hantaan and Puumala pseudovirions for viral tropism and neutralization studies. Virology 423, 134-142, doi:10.1016/j.virol.2011.08.012 (2012).
23 Ray, N., Whidby, J., Stewart, S., Hooper, J. W. & Bertolotti-Ciarlet, A. Study of Andes virus entry and neutralization using a pseudovirion system. J Virol Methods 163, 416-423, doi:10.1016/j.jviromet.2009.11.004 (2010).
24 Basu, M. & Fieldhouse, R. Hantavirus outbreak exposes uncertainty about how disease spreads. Nature, doi:10.1038/d41586-026-01512-w (2026).
25 Liu, R. R. et al. Investigation of a subunit protein vaccine for HFRS based on a consensus sequence between envelope glycoproteins of HTNV and SEOV. Virus Research 334, doi:10.1016/j.virusres.2023.199149 (2023).
26 Arikawa, J., Lapenotiere, H. F., Iacono-Connors, L., Wang, M. L. & Schmaljohn, C. S. Coding properties of the S and the M genome segments of Sapporo rat virus: comparison to other causative agents of hemorrhagic fever with renal syndrome. Virology 176, 114-125, doi:10.1016/0042-6822(90)90236-k (1990).
27 Meissner, J. D., Rowe, J. E., Borucki, M. K. & St Jeor, S. C. Complete nucleotide sequence of a Chilean hantavirus. Virus Res 89, 131-143, doi:10.1016/s0168-1702(02)00129-6 (2002).
28 Li, D. et al. In vitro and in vivo functions of SARS-CoV-2 infection-enhancing and neutralizing antibodies. Cell 184, 4203-+, doi:10.1016/j.cell.2021.06.021 (2021).
29 Schmaljohn, C. S., Schmaljohn, A. L. & Dalrymple, J. M. Hantaan virus M RNA: coding strategy, nucleotide sequence, and gene order. Virology 157, 31-39, doi:10.1016/0042-6822(87)90310-2 (1987).
30 Spiropoulou, C. F. et al. Genome structure and variability of a virus causing hantavirus pulmonary syndrome. Virology 200, 715-723, doi:10.1006/viro.1994.1235 (1994).
31 Johnson, A. M. et al. Laguna Negra virus associated with HPS in western Paraguay and Bolivia. Virology 238, 115-127, doi:10.1006/viro.1997.8840 (1997).
32 Spruill-Harrell, B. et al. Purifying selection constrains the evolution of Juquitiba virus in wild Oligoryzomys nigripes communities. PLoS Pathog 22, e1013839, doi:10.1371/journal.ppat.1013839 (2026).
33 Whitt, M. A. Generation of VSV pseudotypes using recombinant DeltaG-VSV for studies on virus entry, identification of entry inhibitors, and immune responses to vaccines. J Virol Methods 169, 365-374, doi:10.1016/j.jviromet.2010.08.006 (2010).
34 Liu, R. et al. HTNV infection of CD8(+) T cells is associated with disease progression in HFRS patients. Commun Biol 4, 652, doi:10.1038/s42003-021-02182-2 (2021).
35 Vapalahti, O., Kallio-Kokko, H., Salonen, E. M., Brummer-Korvenkontio, M. & Vaheri, A. Cloning and sequencing of Puumala virus Sotkamo strain S and M RNA segments: evidence for strain variation in hantaviruses and expression of the nucleocapsid protein. J Gen Virol 73 ( Pt 4), 829-838, doi:10.1099/0022-1317-73-4-829 (1992).
36 Nemirov, K. et al. Genetic characterization of new Dobrava hantavirus isolate from Greece. J Med Virol 69, 408-416, doi:10.1002/jmv.10304 (2003).
37 Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr D Biol Crystallogr 66, 486-501, doi:10.1107/S0907444910007493 (2010).
38 Pettersen, E. F. et al. UCSF ChimeraX: Structure visualization for researchers, educators, and developers. Protein Sci 30, 70-82, doi:10.1002/pro.3943 (2021).
39 Wang, R. Y. et al. Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta. Elife 5, doi:10.7554/eLife.17219 (2016).
40 Krissinel, E. & Henrick, K. Inference of macromolecular assemblies from crystalline state. J Mol Biol 372, 774-797, doi:10.1016/j.jmb.2007.05.022 (2007).
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