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  • Authors: Xi Chen, Xiaofeng Zhou, Jiawei Zhou, Tengyu Xie, Yaning Li, Yuxuan Yan, Jing Huang, Zibo Chen, Dan Ma, Peilong Lu
    Abstract:

    The transport of molecules across biological membranes is essential for life, allowing cells to acquire nutrients, remove waste, maintain cellular homeostasis and communicate with their environment. Although there have been advances in de novo design of functional transmembrane proteins, designing synthetic transporters that robustly and selectively transport specific small molecules across...

    Keywords: de novo protein design; deep learning; parametric design; transmembrane protein; membrane transport; transporter; dual topology; dynamic; cryo-EM
    Timeline: First Posted 2025-12-31 | Last Updated 2025-12-31
    Metrics: Views: 143  |  Downloads: 21  |  Favorites: 3
  • Authors: Yang Yan, Yanwanyu Xi, Shiqi Fan, Ziyun Tang, Fajie Yuan, Huaizong Shen
    Abstract: Resolving compositional and conformational heterogeneity remains a fundamental bottleneck in single-particle cryo-EM. This challenge stems from a circular dependency: classification requires reliable references, while reference generation requires accurate classification. Current deep learning methods often resort to blind stochastic initialization, frequently becoming trapped in local minima...
    Keywords: CryoDECO; Compositional Heterogeneity; Conformational Heterogeneity; Cryo-EM; Systems Structural Biology
    Timeline: First Posted 2025-12-31 | Last Updated 2025-12-31
    Metrics: Views: 108  |  Downloads: 16  |  Favorites: 0
  • Authors: Xiaojuan Yu, Zhaoxing Wang, Ruifeng Zhang, Wenli Guo, Qing Chang, Wendan Chu, Chengshi Zeng, Lan Wang, Chuanfei Yu, Wenqi Li
    Abstract:

    Exosomes, as key mediators of intercellular communication, have demonstrated great potential in drug delivery. However, their accurate characterization remains challenging due to their complex physical properties. This study purified exosomes from milk and human urine using ultracentrifugation and the EXODUS systems and systematically compared several biophysical techniques to characterize them,...

    Keywords: Exosomes; Characterization; Nanoparticle tracking analysis; Dynamic light scattering; Analytical ultracentrifugation
    Timeline: First Posted 2025-12-31 | Last Updated 2025-12-31
    Metrics: Views: 49  |  Downloads: 18  |  Favorites: 0
  • Authors: Ao Li, Junhui Shi, Dan Ma
    Abstract:

    Fatty acids (FAs) are essential biomolecules that play critical roles in development and growth. Fatty acid transport proteins (FATPs) are responsible for the transport of long-chain FAs (LCFAs) and very-long-chain FAs (VLCFAs), exhibiting bifunctionality that includes both FA transport and acyl-CoA synthetase activity. FATPs are potential drug targets for treating various metabolism-related...

    Keywords: Fatty acid; Transport; FATP; Membrane Protein; Drug Target; LCFA; VLCFA; Acyl-CoA synthetase; Lipid Metabolism; β-oxidation
    Timeline: First Posted 2025-12-29 | Last Updated 2025-12-29
    Metrics: Views: 206  |  Downloads: 37  |  Favorites: 0
  • Authors: Lishuan Wu, Yiming Lei, Hongyun Tang
    Abstract:

    Cells must eliminate various unwanted organelles to maintain homeostasis, yet how they achieve this when their primary degradation system, the lysosome, is impaired remains poorly understood. Here, we discover cytopurgosis, a lysosome-independent organelle-removal pathway that expels multiple organelles, including entire lysosomes, within large extracellular vesicles that we termed "purgasomes"....

    Keywords: organelle-enriched extracellular vesicles; organelle expulsion; lysosomal quality control; organelle removal; lysosomal overload; large extracellular vesicle
    Timeline: First Posted 2025-12-25 | Last Updated 2025-12-25
    Metrics: Views: 639  |  Downloads: 77  |  Favorites: 2
  • Authors: Kefeng Niu
    Abstract:

    Historical records of wildlife are important information in understanding their historical distribution patterns and indigenous knowledge of wildlife in traditional cultures, and have significant academic value and practical implications for the conservation of wildlife. However, the complex system of animal names and numerous synonyms in historical documents often complicates the identification...

    Keywords: Animal Name-Identity Historiography; Dynamic Semantic Triangle; Historical Zoogeography; Linguistic Cognition; Intergrative Conservation; Tale of the Yuan's return; Trachypithecus francoisi
    Timeline: First Posted 2025-12-25 | Last Updated 2025-12-25
    Metrics: Views: 395  |  Downloads: 52  |  Favorites: 1
  • Authors: Hailin Lu, Qingqing Guo, Qinling Qiu, Jiying Hu
    Abstract:

    The human Ether-a-go-go Related Gene (hERG)-encoded potassium channel is critical for cardiac ventricular action potential repolarization and serves as a core target for preclinical drug safety screening. The lack of stable, high-expression hERG cell models has limited the reliability and throughput of functional assays for hERG channel evaluation. Thus, developing a robust stable hERG-expressing...

    Keywords: hERG channel; automated patch-clamp; drug safety screening
    Timeline: First Posted 2025-12-25 | Last Updated 2025-12-25
    Metrics: Views: 230  |  Downloads: 41  |  Favorites: 2
  • Authors: Yuru Han, Song Xue, Wei Xu, Yuanzhe Zhang, Xiaofang Peng, Yunjiao Zhou, Fei Wu, Minxiang Xie, Wei Wu, Anqi Xia, Yidan Gao, Jianbo Wu, Zezhong Liu, Jingsong Zhang, Shibo Jiang, Zhixiang Zuo, Fan Wu, Qiao Wang
    Abstract:

    Antibody-dependent enhancement (ADE) of viral entry remains a mechanistically unresolved phenomenon in SARS-CoV-2 variants, with its variant-specificity and pathological consequences poorly defined. Through systematic profiling of 114 monoclonal antibodies (mAbs) across major variants of concern (VOCs), we discover that the Delta variant exhibits uniquely potent ADE mediated by mAbs targeting...

    Keywords: SARS-CoV-2; ADE; antibody; variant
    Timeline: First Posted 2025-12-22 | Last Updated 2025-12-22
    Metrics: Views: 270  |  Downloads: 72  |  Favorites: 0
  • Authors: Xinyu Cheng, Shuangyan Wan, Dexiang Jiang, Hangyu Zhang, Bin Hu, Tong Che, Weiwei Nan, Zhuo Zhou, Chenxin Xiao, Ling Zhong, Yuting Zhang, Bo Yu, Ougen Liu, Jingjing Duan, Bing Xiong, Panpan Hou, Jin Zhang
    Abstract:

    The heteromeric KCNQ2/3 channel constitutes the molecular correlate of the neuronal M-current, a potassium conductance essential for stabilizing resting membrane potential and controlling neuronal excitability. Despite its physiological and therapeutic importance, the structural basis for its unique functional properties—distinct from homomeric KCNQ2 or KCNQ3—has remained enigmatic, and its...

    Keywords: cryo-EM; ion channel structure; kcnq2/3
    Timeline: First Posted 2025-12-22 | Last Updated 2025-12-22
    Metrics: Views: 658  |  Downloads: 209  |  Favorites: 7
  • Authors: Feng Chen, Zhuo Chen, Yongjun Tan, Xin Ye Shen, Matthew Leong, Jian Yuan Yang, Wan Hua Li, Yun Nan Hou, Guo Bao, Yue Jun Chen, Yu Ran Ma, Ting-Fung Chan, Hon Cheung Lee, Gyeong Hun Baeg, Dapeng Zhang, Yong Juan Zhao
    Abstract: Conserved TIR domain proteins play essential roles in immune signaling, development, and neurodegeneration. Here, we identify Raw as a member of a distinct TIR protein family that functions as a cADPR-specific hydrolase, with catalytic mutations phenocopying delayed axon degeneration. While Raw and dSarm synergistically deplete NAD to drive axon degeneration, they antagonistically regulate cADPR...
    Keywords: Raw/OLRN-1; cADPR; NAD; SARM1/dSarm; TIR domain; axon degeneration; development; evolutionary analysis
    Timeline: First Posted 2025-12-19 | Last Updated 2025-12-19
    Metrics: Views: 657  |  Downloads: 253  |  Favorites: 1
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